STRINGSTRING
JQMD01000002_gene189 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene189" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene189annotation not available (1064 aa)    
Predicted Functional Partners:
JQMD01000002_gene190
annotation not available (587 aa)
 
        0.961
JQMD01000002_gene192
annotation not available (567 aa)
 
          0.903
JQMD01000002_gene193
annotation not available (341 aa)
 
          0.844
JQMD01000002_gene290
annotation not available (602 aa)
   
          0.779
JQMD01000002_gene292
annotation not available (558 aa)
   
          0.778
JQMD01000002_gene3463
annotation not available (549 aa)
   
          0.776
JQMD01000002_gene1656
annotation not available (571 aa)
   
          0.775
JQMD01000002_gene3087
annotation not available (584 aa)
   
        0.766
JQMD01000002_gene3620
annotation not available (513 aa)
   
          0.766
JQMD01000002_gene151
annotation not available (498 aa)
 
          0.763
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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