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JQMD01000002_gene1908 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1908" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1908annotation not available (223 aa)    
Predicted Functional Partners:
JQMD01000002_gene1907
annotation not available (218 aa)
 
          0.975
JQMD01000002_gene1909
annotation not available (92 aa)
 
          0.973
JQMD01000002_gene1906
annotation not available (367 aa)
 
          0.932
JQMD01000002_gene1910
annotation not available (278 aa)
 
          0.844
JQMD01000002_gene1877
annotation not available (173 aa)
 
          0.762
JQMD01000002_gene1887
annotation not available (308 aa)
   
          0.755
JQMD01000002_gene1890
annotation not available (193 aa)
   
          0.753
JQMD01000002_gene1886
annotation not available (275 aa)
 
          0.738
JQMD01000002_gene1891
annotation not available (808 aa)
 
          0.737
JQMD01000002_gene1888
annotation not available (207 aa)
   
          0.726
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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