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JQMD01000002_gene1917 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1917" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1917annotation not available (406 aa)    
Predicted Functional Partners:
JQMD01000002_gene2845
annotation not available (610 aa)
   
          0.734
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (846 aa)
              0.715
JQMD01000002_gene2740
annotation not available (202 aa)
   
          0.703
JQMD01000002_gene2632
annotation not available (202 aa)
   
 
      0.701
JQMD01000002_gene1452
annotation not available (1476 aa)
   
          0.679
JQMD01000002_gene2964
annotation not available (236 aa)
   
          0.677
JQMD01000002_gene3677
annotation not available (145 aa)
   
          0.672
JQMD01000002_gene1518
annotation not available (573 aa)
   
 
      0.660
JQMD01000002_gene44
annotation not available (162 aa)
   
          0.653
JQMD01000002_gene3142
annotation not available (718 aa)
   
 
      0.648
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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