STRINGSTRING
JQMD01000002_gene1932 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1932" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1932annotation not available (375 aa)    
Predicted Functional Partners:
JQMD01000002_gene1934
annotation not available (237 aa)
            0.973
JQMD01000002_gene1933
annotation not available (233 aa)
              0.845
JQMD01000002_gene3748
annotation not available (1054 aa)
     
 
  0.811
JQMD01000002_gene998
annotation not available (658 aa)
     
 
  0.807
JQMD01000002_gene1056
annotation not available (803 aa)
     
 
  0.807
JQMD01000002_gene3760
annotation not available (765 aa)
   
 
  0.794
JQMD01000002_gene3126
annotation not available (692 aa)
         
  0.789
JQMD01000002_gene657
annotation not available (372 aa)
     
  0.773
JQMD01000002_gene2275
annotation not available (360 aa)
         
  0.771
JQMD01000002_gene893
annotation not available (408 aa)
   
   
  0.710
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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