STRINGSTRING
JQMD01000002_gene1938 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1938" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1938annotation not available (277 aa)    
Predicted Functional Partners:
JQMD01000002_gene1937
annotation not available (217 aa)
 
          0.907
JQMD01000002_gene1939
annotation not available (182 aa)
              0.889
JQMD01000002_gene1936
annotation not available (479 aa)
 
          0.791
JQMD01000002_gene3218
annotation not available (319 aa)
   
          0.745
JQMD01000002_gene4062
annotation not available (584 aa)
   
          0.744
JQMD01000002_gene1489
annotation not available (181 aa)
   
          0.735
JQMD01000002_gene1452
annotation not available (1476 aa)
   
          0.731
JQMD01000002_gene3677
annotation not available (145 aa)
   
          0.723
JQMD01000002_gene2075
annotation not available (233 aa)
   
          0.720
JQMD01000002_gene3810
annotation not available (906 aa)
   
          0.715
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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