STRINGSTRING
JQMD01000002_gene1945 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1945" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1945annotation not available (300 aa)    
Predicted Functional Partners:
JQMD01000002_gene1946
annotation not available (302 aa)
 
          0.975
JQMD01000002_gene1947
annotation not available (285 aa)
 
          0.974
JQMD01000002_gene1943
annotation not available (397 aa)
 
        0.952
JQMD01000002_gene1942
annotation not available (457 aa)
 
        0.951
JQMD01000002_gene1944
annotation not available (386 aa)
 
     
  0.948
JQMD01000002_gene1941
annotation not available (125 aa)
 
          0.862
JQMD01000002_gene432
annotation not available (1010 aa)
 
          0.779
JQMD01000002_gene2265
annotation not available (311 aa)
   
 
  0.725
JQMD01000002_gene1402
annotation not available (2042 aa)
 
          0.714
JQMD01000002_gene2079
annotation not available (181 aa)
       
  0.674
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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