STRINGSTRING
JQMD01000002_gene1954 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1954" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1954annotation not available (110 aa)    
Predicted Functional Partners:
JQMD01000002_gene1952
annotation not available (301 aa)
       
    0.969
JQMD01000002_gene1956
annotation not available (179 aa)
              0.889
pyrB
annotation not available (308 aa)
              0.889
JQMD01000002_gene1953
annotation not available (157 aa)
              0.845
JQMD01000002_gene2928
annotation not available (378 aa)
   
          0.770
JQMD01000002_gene55
annotation not available (96 aa)
   
          0.766
JQMD01000002_gene3184
annotation not available (73 aa)
   
          0.766
JQMD01000002_gene524
annotation not available (157 aa)
   
          0.759
JQMD01000002_gene2722
annotation not available (209 aa)
   
          0.758
JQMD01000002_gene763
annotation not available (125 aa)
   
          0.745
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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