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JQMD01000002_gene1968 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1968" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1968annotation not available (799 aa)    
Predicted Functional Partners:
JQMD01000002_gene505
annotation not available (571 aa)
 
 
  0.854
JQMD01000002_gene3017
annotation not available (471 aa)
 
   
  0.826
JQMD01000002_gene1372
annotation not available (744 aa)
 
 
  0.817
JQMD01000002_gene2688
annotation not available (767 aa)
 
   
  0.812
JQMD01000002_gene1980
annotation not available (564 aa)
 
 
  0.790
JQMD01000002_gene3064
annotation not available (447 aa)
   
 
  0.788
JQMD01000002_gene2927
annotation not available (315 aa)
 
   
    0.778
JQMD01000002_gene1721
annotation not available (663 aa)
       
    0.761
JQMD01000002_gene3585
annotation not available (293 aa)
       
    0.746
JQMD01000002_gene1967
annotation not available (269 aa)
              0.744
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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