STRINGSTRING
JQMD01000002_gene1983 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1983" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1983annotation not available (215 aa)    
Predicted Functional Partners:
JQMD01000002_gene1982
annotation not available (164 aa)
 
          0.922
JQMD01000002_gene410
annotation not available (111 aa)
 
          0.760
JQMD01000002_gene498
annotation not available (173 aa)
   
          0.730
JQMD01000002_gene4200
annotation not available (277 aa)
   
          0.718
JQMD01000002_gene1055
annotation not available (935 aa)
   
          0.715
JQMD01000002_gene2842
annotation not available (541 aa)
   
          0.703
JQMD01000002_gene1074
annotation not available (152 aa)
   
          0.696
JQMD01000002_gene3582
annotation not available (102 aa)
   
          0.616
JQMD01000002_gene2076
annotation not available (89 aa)
   
          0.612
JQMD01000002_gene455
annotation not available (171 aa)
   
          0.609
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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