STRINGSTRING
JQMD01000002_gene1986 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1986" - annotation not available in Zobellia uliginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1986annotation not available (236 aa)    
Predicted Functional Partners:
JQMD01000002_gene2306
annotation not available (1128 aa)
       
    0.760
JQMD01000002_gene1985
annotation not available (214 aa)
     
      0.760
JQMD01000002_gene1984
annotation not available (271 aa)
              0.651
JQMD01000002_gene1922
annotation not available (814 aa)
       
    0.598
JQMD01000002_gene2057
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity (630 aa)
     
  0.570
dnaK
Chaperone protein DnaK; Acts as a chaperone (635 aa)
 
  0.559
fusA
Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (711 aa)
   
  0.556
JQMD01000002_gene2922
annotation not available (241 aa)
       
  0.522
JQMD01000002_gene2633
annotation not available (442 aa)
   
      0.480
JQMD01000002_gene2586
annotation not available (290 aa)
   
 
    0.455
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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