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JQMD01000002_gene1992 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1992" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1992annotation not available (405 aa)    
Predicted Functional Partners:
JQMD01000002_gene1989
annotation not available (319 aa)
          0.989
JQMD01000002_gene1991
annotation not available (246 aa)
 
          0.975
JQMD01000002_gene1990
annotation not available (290 aa)
 
          0.970
JQMD01000002_gene1988
annotation not available (238 aa)
 
          0.938
JQMD01000002_gene1994
annotation not available (412 aa)
 
          0.930
JQMD01000002_gene1993
annotation not available (332 aa)
 
          0.879
JQMD01000002_gene1987
annotation not available (205 aa)
              0.553
JQMD01000002_gene2271
annotation not available (636 aa)
   
          0.518
JQMD01000002_gene2270
annotation not available (706 aa)
   
          0.505
JQMD01000002_gene4050
annotation not available (655 aa)
   
          0.503
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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