STRINGSTRING
JQMD01000002_gene2018 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2018" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2018annotation not available (802 aa)    
Predicted Functional Partners:
JQMD01000002_gene2019
annotation not available (299 aa)
              0.845
JQMD01000002_gene661
annotation not available (980 aa)
   
        0.557
JQMD01000002_gene1867
annotation not available (1029 aa)
   
        0.540
JQMD01000002_gene634
annotation not available (1026 aa)
   
        0.527
JQMD01000002_gene2804
annotation not available (1032 aa)
   
        0.524
JQMD01000002_gene1657
annotation not available (1034 aa)
   
        0.522
JQMD01000002_gene2363
annotation not available (1135 aa)
   
          0.517
JQMD01000002_gene1363
annotation not available (1026 aa)
   
        0.516
JQMD01000002_gene681
annotation not available (1046 aa)
   
        0.513
JQMD01000002_gene3086
annotation not available (1032 aa)
   
        0.505
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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