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JQMD01000002_gene2042 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2042" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2042annotation not available (50 aa)    
Predicted Functional Partners:
rpmG
annotation not available (60 aa)
              0.802
rpmB
annotation not available (78 aa)
              0.797
JQMD01000002_gene2045
annotation not available (416 aa)
              0.705
JQMD01000002_gene2047
annotation not available (203 aa)
              0.633
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (318 aa)
              0.632
JQMD01000002_gene2046
annotation not available (112 aa)
              0.624
JQMD01000002_gene4235
annotation not available (75 aa)
   
          0.576
JQMD01000002_gene2048
annotation not available (258 aa)
              0.562
JQMD01000002_gene2133
annotation not available (130 aa)
   
          0.492
JQMD01000002_gene43
annotation not available (274 aa)
   
          0.480
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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