STRINGSTRING
JQMD01000002_gene2069 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2069" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2069annotation not available (749 aa)    
Predicted Functional Partners:
JQMD01000002_gene2242
annotation not available (367 aa)
   
   
  0.832
JQMD01000002_gene3232
annotation not available (780 aa)
   
   
 
0.777
JQMD01000002_gene2906
annotation not available (781 aa)
         
0.744
JQMD01000002_gene395
annotation not available (422 aa)
   
 
  0.733
JQMD01000002_gene2070
annotation not available (267 aa)
              0.723
JQMD01000002_gene2615
annotation not available (427 aa)
   
 
 
  0.692
JQMD01000002_gene2247
annotation not available (668 aa)
 
 
  0.683
JQMD01000002_gene2614
annotation not available (641 aa)
   
 
  0.652
JQMD01000002_gene2071
annotation not available (438 aa)
              0.634
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA); Belongs to the MurCDEF family (444 aa)
 
     
  0.630
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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