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JQMD01000002_gene2079 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2079" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2079annotation not available (181 aa)    
Predicted Functional Partners:
JQMD01000002_gene2682
annotation not available (361 aa)
 
 
  0.993
JQMD01000002_gene2078
annotation not available (135 aa)
              0.889
JQMD01000002_gene3386
annotation not available (324 aa)
 
 
  0.829
JQMD01000002_gene2077
annotation not available (320 aa)
              0.817
JQMD01000002_gene2680
annotation not available (275 aa)
       
  0.769
JQMD01000002_gene1455
annotation not available (215 aa)
     
 
  0.711
JQMD01000002_gene2265
annotation not available (311 aa)
   
 
  0.711
JQMD01000002_gene2628
annotation not available (440 aa)
   
   
  0.704
JQMD01000002_gene1945
annotation not available (300 aa)
       
  0.674
JQMD01000002_gene2076
annotation not available (89 aa)
              0.671
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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