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JQMD01000002_gene2087 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2087" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2087annotation not available (319 aa)    
Predicted Functional Partners:
JQMD01000002_gene2086
annotation not available (631 aa)
 
 
  0.944
JQMD01000002_gene2088
annotation not available (1023 aa)
 
          0.882
JQMD01000002_gene4207
annotation not available (642 aa)
 
 
  0.833
JQMD01000002_gene3161
annotation not available (860 aa)
 
 
  0.828
JQMD01000002_gene699
annotation not available (400 aa)
   
 
      0.813
JQMD01000002_gene3449
annotation not available (650 aa)
 
      0.762
JQMD01000002_gene3824
annotation not available (232 aa)
   
          0.740
JQMD01000002_gene3762
annotation not available (2376 aa)
   
          0.735
JQMD01000002_gene3794
annotation not available (645 aa)
   
      0.726
JQMD01000002_gene2200
annotation not available (392 aa)
   
          0.720
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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