STRINGSTRING
JQMD01000002_gene2107 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2107" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2107annotation not available (75 aa)    
Predicted Functional Partners:
JQMD01000002_gene2106
annotation not available (337 aa)
              0.889
JQMD01000002_gene2108
annotation not available (424 aa)
              0.731
JQMD01000002_gene2105
annotation not available (690 aa)
              0.684
JQMD01000002_gene2104
annotation not available (298 aa)
              0.664
JQMD01000002_gene2103
annotation not available (389 aa)
              0.660
JQMD01000002_gene4235
annotation not available (75 aa)
   
          0.642
JQMD01000002_gene2680
annotation not available (275 aa)
   
          0.560
JQMD01000002_gene1984
annotation not available (271 aa)
   
          0.525
JQMD01000002_gene764
annotation not available (126 aa)
   
          0.462
JQMD01000002_gene465
annotation not available (220 aa)
   
          0.452
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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