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JQMD01000002_gene2109 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2109" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2109annotation not available (103 aa)    
Predicted Functional Partners:
JQMD01000002_gene2085
annotation not available (1484 aa)
       
    0.641
JQMD01000002_gene3748
annotation not available (1054 aa)
       
  0.640
JQMD01000002_gene4328
annotation not available (731 aa)
         
  0.623
JQMD01000002_gene1015
annotation not available (969 aa)
       
  0.621
JQMD01000002_gene1649
annotation not available (713 aa)
         
  0.614
JQMD01000002_gene2306
annotation not available (1128 aa)
       
  0.601
JQMD01000002_gene2110
annotation not available (149 aa)
              0.598
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (961 aa)
       
    0.584
JQMD01000002_gene1922
annotation not available (814 aa)
         
  0.581
JQMD01000002_gene3063
annotation not available (1176 aa)
       
  0.542
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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