STRINGSTRING
JQMD01000002_gene212 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene212" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene212annotation not available (449 aa)    
Predicted Functional Partners:
JQMD01000002_gene211
annotation not available (396 aa)
 
          0.871
JQMD01000002_gene3125
annotation not available (807 aa)
 
   
  0.698
JQMD01000002_gene1293
annotation not available (447 aa)
 
   
    0.680
JQMD01000002_gene3332
annotation not available (1070 aa)
 
   
    0.671
JQMD01000002_gene214
annotation not available (402 aa)
              0.665
JQMD01000002_gene213
annotation not available (524 aa)
              0.665
JQMD01000002_gene1968
annotation not available (799 aa)
 
   
  0.654
JQMD01000002_gene3064
annotation not available (447 aa)
       
  0.653
JQMD01000002_gene295
annotation not available (382 aa)
 
   
    0.608
JQMD01000002_gene2085
annotation not available (1484 aa)
       
  0.598
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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