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JQMD01000002_gene2121 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2121" - annotation not available in Zobellia uliginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2121annotation not available (221 aa)    
Predicted Functional Partners:
JQMD01000002_gene2122
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second (1150 aa)
              0.812
JQMD01000002_gene1927
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose (275 aa)
   
          0.736
JQMD01000002_gene3523
annotation not available (154 aa)
   
          0.699
JQMD01000002_gene3099
annotation not available (126 aa)
   
          0.697
JQMD01000002_gene3362
annotation not available (137 aa)
   
          0.691
JQMD01000002_gene2140
annotation not available (88 aa)
   
          0.655
JQMD01000002_gene3375
annotation not available (83 aa)
   
          0.647
JQMD01000002_gene2607
annotation not available (137 aa)
   
          0.618
JQMD01000002_gene1111
annotation not available (394 aa)
   
          0.585
JQMD01000002_gene2328
annotation not available (129 aa)
   
          0.573
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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