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JQMD01000002_gene2129 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2129" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2129annotation not available (134 aa)    
Predicted Functional Partners:
JQMD01000002_gene1320
annotation not available (1326 aa)
   
 
  0.938
JQMD01000002_gene2128
annotation not available (615 aa)
 
   
    0.921
JQMD01000002_gene4283
annotation not available (663 aa)
       
  0.864
JQMD01000002_gene2157
annotation not available (745 aa)
 
   
  0.819
JQMD01000002_gene2046
annotation not available (112 aa)
 
  0.760
JQMD01000002_gene853
annotation not available (747 aa)
 
   
  0.731
JQMD01000002_gene855
annotation not available (873 aa)
 
   
  0.728
JQMD01000002_gene2130
annotation not available (590 aa)
              0.727
JQMD01000002_gene477
annotation not available (742 aa)
   
 
  0.689
JQMD01000002_gene3394
annotation not available (409 aa)
 
   
  0.661
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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