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JQMD01000002_gene2133 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2133" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2133annotation not available (130 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (213 aa)
       
    0.970
JQMD01000002_gene4172
annotation not available (345 aa)
         
    0.969
pyrF
annotation not available (269 aa)
         
    0.969
JQMD01000002_gene2131
annotation not available (198 aa)
 
          0.770
JQMD01000002_gene4235
annotation not available (75 aa)
   
          0.763
JQMD01000002_gene1207
annotation not available (95 aa)
   
          0.749
JQMD01000002_gene2384
annotation not available (666 aa)
   
          0.733
JQMD01000002_gene44
annotation not available (162 aa)
   
          0.728
JQMD01000002_gene43
annotation not available (274 aa)
   
          0.709
JQMD01000002_gene2681
annotation not available (312 aa)
   
          0.696
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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