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JQMD01000002_gene2143 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2143" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2143annotation not available (197 aa)    
Predicted Functional Partners:
JQMD01000002_gene3440
annotation not available (243 aa)
   
          0.748
JQMD01000002_gene2142
annotation not available (422 aa)
              0.616
JQMD01000002_gene2141
annotation not available (253 aa)
 
          0.580
JQMD01000002_gene1158
annotation not available (214 aa)
   
          0.564
JQMD01000002_gene869
annotation not available (361 aa)
   
          0.477
JQMD01000002_gene4028
annotation not available (847 aa)
   
          0.465
JQMD01000002_gene1999
annotation not available (1136 aa)
   
          0.443
JQMD01000002_gene1970
annotation not available (188 aa)
   
          0.437
JQMD01000002_gene2369
annotation not available (1064 aa)
   
          0.436
JQMD01000002_gene82
annotation not available (437 aa)
   
          0.423
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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