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JQMD01000002_gene2148 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2148" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2148annotation not available (430 aa)    
Predicted Functional Partners:
JQMD01000002_gene2306
annotation not available (1128 aa)
       
    0.977
JQMD01000002_gene2774
annotation not available (416 aa)
         
    0.969
JQMD01000002_gene2790
annotation not available (219 aa)
         
    0.966
JQMD01000002_gene1922
annotation not available (814 aa)
       
    0.957
JQMD01000002_gene4077
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate (308 aa)
       
    0.748
JQMD01000002_gene2149
annotation not available (396 aa)
              0.674
JQMD01000002_gene2843
annotation not available (928 aa)
   
          0.630
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (510 aa)
       
  0.629
JQMD01000002_gene2150
annotation not available (338 aa)
              0.628
JQMD01000002_gene3657
annotation not available (163 aa)
 
          0.558
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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