STRINGSTRING
JQMD01000002_gene2175 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2175" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2175annotation not available (182 aa)    
Predicted Functional Partners:
JQMD01000002_gene2174
annotation not available (770 aa)
 
          0.916
JQMD01000002_gene2176
annotation not available (276 aa)
              0.845
JQMD01000002_gene2178
annotation not available (249 aa)
 
          0.788
JQMD01000002_gene2177
annotation not available (259 aa)
 
          0.704
JQMD01000002_gene3303
annotation not available (194 aa)
 
          0.658
JQMD01000002_gene4200
annotation not available (277 aa)
   
          0.642
JQMD01000002_gene2173
annotation not available (112 aa)
              0.550
JQMD01000002_gene1135
annotation not available (831 aa)
   
          0.523
JQMD01000002_gene2201
annotation not available (375 aa)
   
          0.508
JQMD01000002_gene2172
annotation not available (190 aa)
              0.503
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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