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JQMD01000002_gene2179 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2179" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2179annotation not available (1041 aa)    
Predicted Functional Partners:
JQMD01000002_gene2180
annotation not available (383 aa)
 
          0.944
JQMD01000002_gene2085
annotation not available (1484 aa)
 
   
  0.906
JQMD01000002_gene3792
annotation not available (1232 aa)
 
 
  0.892
JQMD01000002_gene2083
annotation not available (3437 aa)
 
   
  0.887
JQMD01000002_gene2082
annotation not available (675 aa)
 
   
  0.798
JQMD01000002_gene2088
annotation not available (1023 aa)
 
     
  0.765
JQMD01000002_gene1152
annotation not available (199 aa)
   
          0.764
JQMD01000002_gene4209
annotation not available (2618 aa)
       
  0.759
JQMD01000002_gene2157
annotation not available (745 aa)
 
 
  0.751
JQMD01000002_gene2856
annotation not available (298 aa)
   
          0.747
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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