STRINGSTRING
JQMD01000002_gene2186 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2186" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2186annotation not available (252 aa)    
Predicted Functional Partners:
JQMD01000002_gene2414
annotation not available (286 aa)
       
  0.800
JQMD01000002_gene2187
annotation not available (254 aa)
 
          0.776
JQMD01000002_gene4264
annotation not available (350 aa)
         
  0.639
JQMD01000002_gene2126
annotation not available (327 aa)
       
  0.630
JQMD01000002_gene3182
annotation not available (362 aa)
   
   
    0.578
JQMD01000002_gene2344
annotation not available (425 aa)
         
  0.577
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily (307 aa)
       
    0.539
JQMD01000002_gene2185
annotation not available (166 aa)
              0.447
JQMD01000002_gene2184
annotation not available (413 aa)
              0.447
JQMD01000002_gene2242
annotation not available (367 aa)
   
   
    0.415
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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