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JQMD01000002_gene2276 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene2276" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene2276annotation not available (286 aa)    
Predicted Functional Partners:
JQMD01000002_gene2275
annotation not available (360 aa)
 
  0.993
JQMD01000002_gene2278
annotation not available (275 aa)
 
 
  0.980
JQMD01000002_gene2277
annotation not available (381 aa)
 
   
  0.969
JQMD01000002_gene2268
annotation not available (397 aa)
     
  0.951
JQMD01000002_gene2306
annotation not available (1128 aa)
       
  0.918
JQMD01000002_gene4314
annotation not available (163 aa)
 
 
  0.833
JQMD01000002_gene1959
annotation not available (230 aa)
       
  0.803
hisC
annotation not available (349 aa)
   
 
  0.792
JQMD01000002_gene4190
annotation not available (395 aa)
   
 
  0.792
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (356 aa)
     
  0.792
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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