parPi_0029129 protein (Paroedura picta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

parPi_0029129

Uncharacterized protein. (146 aa)

Predicted Functional Partners:

parPi_0001311

0.745

parPi_0005149

0.745

parPi_0000425

0.662

parPi_0002028

0.662

parPi_0003168

0.662

parPi_0007271

0.662

parPi_0015168

0.662

parPi_0018850

0.662

parPi_0007966

0.609

parPi_0014215

0.609

Your Current Organism:

Paroedura picta

NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
parPi_0000425	parPi_0007966	A0A402E6N7	A0A402EUF6	Uncharacterized protein.	Uncharacterized protein.	0.512
parPi_0000425	parPi_0014215	A0A402E6N7	A0A402F841	Uncharacterized protein.	Uncharacterized protein.	0.511
parPi_0000425	parPi_0029129	A0A402E6N7	A0A402FZP3	Uncharacterized protein.	Uncharacterized protein.	0.662
parPi_0001311	parPi_0007966	A0A402EAM3	A0A402EUF6	Uncharacterized protein.	Uncharacterized protein.	0.562
parPi_0001311	parPi_0014215	A0A402EAM3	A0A402F841	Uncharacterized protein.	Uncharacterized protein.	0.560
parPi_0001311	parPi_0029129	A0A402EAM3	A0A402FZP3	Uncharacterized protein.	Uncharacterized protein.	0.745
parPi_0002028	parPi_0007966	A0A402EDH3	A0A402EUF6	Uncharacterized protein.	Uncharacterized protein.	0.511
parPi_0002028	parPi_0014215	A0A402EDH3	A0A402F841	Uncharacterized protein.	Uncharacterized protein.	0.512
parPi_0002028	parPi_0029129	A0A402EDH3	A0A402FZP3	Uncharacterized protein.	Uncharacterized protein.	0.662
parPi_0003168	parPi_0007966	A0A402EI42	A0A402EUF6	Uncharacterized protein.	Uncharacterized protein.	0.512
parPi_0003168	parPi_0014215	A0A402EI42	A0A402F841	Uncharacterized protein.	Uncharacterized protein.	0.512
parPi_0003168	parPi_0029129	A0A402EI42	A0A402FZP3	Uncharacterized protein.	Uncharacterized protein.	0.662
parPi_0005149	parPi_0007966	A0A402EN10	A0A402EUF6	Uncharacterized protein.	Uncharacterized protein.	0.563
parPi_0005149	parPi_0014215	A0A402EN10	A0A402F841	Uncharacterized protein.	Uncharacterized protein.	0.561
parPi_0005149	parPi_0029129	A0A402EN10	A0A402FZP3	Uncharacterized protein.	Uncharacterized protein.	0.745
parPi_0007271	parPi_0007966	A0A402ESX7	A0A402EUF6	Uncharacterized protein.	Uncharacterized protein.	0.521
parPi_0007271	parPi_0014215	A0A402ESX7	A0A402F841	Uncharacterized protein.	Uncharacterized protein.	0.521
parPi_0007271	parPi_0029129	A0A402ESX7	A0A402FZP3	Uncharacterized protein.	Uncharacterized protein.	0.662
parPi_0007966	parPi_0000425	A0A402EUF6	A0A402E6N7	Uncharacterized protein.	Uncharacterized protein.	0.512
parPi_0007966	parPi_0001311	A0A402EUF6	A0A402EAM3	Uncharacterized protein.	Uncharacterized protein.	0.562