STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000970685_00954Unannotated protein. (505 aa)    
Predicted Functional Partners:
GCA_000970685_00953
Unannotated protein.
 
 
  0.914
GCA_000970685_03035
Unannotated protein.
 
   
 0.886
GCA_000970685_02700
Unannotated protein.
  
 
 0.844
GCA_000970685_03520
Unannotated protein.
   
 
 0.841
GCA_000970685_03566
Unannotated protein.
  
 0.799
GCA_000970685_01689
Unannotated protein.
   
 0.796
GCA_000970685_00099
Unannotated protein.
   
 
 0.790
GCA_000970685_01318
Unannotated protein.
    
 0.754
GCA_000970685_03597
Unannotated protein.
  
 0.754
GCA_000970685_00947
Unannotated protein.
   
 0.751
Your Current Organism:
Domibacillus indicus
NCBI taxonomy Id: 1437523
Other names: D. indicus, DSM 28032, Domibacillus indicus Sharma et al. 2014, Domibacillus sp. SD111, MCC 2255, strain SD 111, strain SD111
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.