STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y717_17530Unannotated protein. (420 aa)    
Predicted Functional Partners:
Y717_12650
Unannotated protein.
  
 0.925
Y717_17535
Unannotated protein.
 
     0.782
Y717_34115
Unannotated protein.
 
 0.775
Y717_25080
Unannotated protein.
  
  0.762
Y717_04680
Unannotated protein.
 
  0.748
Y717_18520
Unannotated protein.
 
  0.745
Y717_06415
Unannotated protein.
  
     0.742
Y717_29660
Unannotated protein.
  
  0.733
Y717_32940
Unannotated protein.
  
 0.729
Y717_03745
Unannotated protein.
  
  0.722
Your Current Organism:
Streptomyces scopuliridis
NCBI taxonomy Id: 1440053
Other names: S. scopuliridis RB72, Streptomyces scopuliridis NRRL B-24574, Streptomyces scopuliridis RB72, Streptomyces sp. RB72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.