STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103354601Grancalcin. (249 aa)    
Predicted Functional Partners:
ENSSPAP00000024918
Uncharacterized protein.
   
 0.828
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.675
noa1
Nitric oxide associated 1.
     
 0.665
ENSSPAP00000022263
Uncharacterized protein.
  
0.608
CAPN6
Calpain 6; Belongs to the peptidase C2 family.
   
 0.588
LOC103376333
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 0.588
capn15
Calpain 15; Belongs to the peptidase C2 family.
   
 0.588
ENSSPAP00000003551
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 0.588
LOC103375177
Calpain 1, (mu/I) large subunit b; Belongs to the peptidase C2 family.
   
0.588
LOC103375176
Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family.
   
0.588
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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