STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000019281Uncharacterized protein. (367 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.951
tomm34
Translocase of outer mitochondrial membrane 34.
 
     
0.896
LOC103371827
Uncharacterized protein.
 
     
0.896
ak9
Adenylate kinase 9.
   
 0.889
ENSSPAP00000019252
Uncharacterized protein.
 
    
0.888
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.789
bbs9
Bardet-Biedl syndrome 9.
    
 0.779
ENSSPAP00000016296
DUF4062 domain-containing protein.
   
 0.772
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
    
 0.764
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.763
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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