STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
petCCytochrome b6-f complex iron-sulfur subunit. (170 aa)    
Predicted Functional Partners:
CDZ79845.1
Putative bifunctional cbb3-type cytochrome c oxidase subunit II/cytochrome c.
 
 0.999
petB
Cytochrome b6.
 
 0.999
gltD
Glutamate synthase [NADPH] small chain.
 
 0.999
aas
Bifunctional protein aas.
  
 0.999
cyoC
Cytochrome o ubiquinol oxidase subunit 3.
  
 0.998
CDZ80575.1
Peptidase M16 inactive domain protein.
  
 0.998
cyoB
Ubiquinol oxidase subunit 1.
  
 0.997
cyoA
Ubiquinol oxidase subunit 2 precursor.
  
 0.995
CDZ81030.1
Epimerase family protein.
 
 0.995
frdB
Fumarate reductase iron-sulfur subunit.
  
 0.951
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.