STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ13499.1Glycolate oxidase FAD binding subunit. (370 aa)    
Predicted Functional Partners:
SHJ13479.1
Glycolate oxidase iron-sulfur subunit.
 
 0.996
SHJ13517.1
Glycolate oxidase.
  
  0.980
SHI59796.1
Catalase.
   
 0.857
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.852
SHJ21332.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
   
 
 0.842
SHI63746.1
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 
  0.838
SHI31048.1
Phosphoglycolate phosphatase.
    
  0.837
SHI64191.1
Phosphoglycolate phosphatase.
    
  0.837
SHJ06664.1
D-lactate dehydrogenase (cytochrome).
  
 
0.830
SHJ00210.1
Glutamate synthase (NADPH) large subunit.
    
 0.827
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.