STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJ78_04322Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
AJ78_05244
Nsp1_C domain-containing protein.
    
 0.778
AJ78_01746
WD_REPEATS_REGION domain-containing protein.
    
 0.660
AJ78_05757
SPRY domain-containing protein.
    
 0.656
AJ78_01687
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.641
AJ78_02100
Uncharacterized protein.
    
 0.641
AJ78_04931
ULK/ULK protein kinase.
    
 0.636
AJ78_02283
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.635
AJ78_06423
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.634
AJ78_06765
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.623
AJ78_01207
Uncharacterized protein.
    
 0.618
Your Current Organism:
Emergomyces pasteurianus
NCBI taxonomy Id: 1447872
Other names: E. pasteurianus Ep9510, Emergomyces pasteuriana Ep9510, Emergomyces pasteurianus Ep9510, Emmonsia pasteuriana Ep9510, Emmonsia pasteuriana UAMH 9510
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