STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJ80_05858Uncharacterized protein. (1159 aa)    
Predicted Functional Partners:
AJ80_07316
Uncharacterized protein.
   
 0.888
AJ80_01238
ANK_REP_REGION domain-containing protein.
   
  0.630
AJ80_04443
C3H1-type domain-containing protein.
    
  0.552
AJ80_07087
Uncharacterized protein.
  
 
  0.499
AJ80_04154
Uncharacterized protein.
    
  0.494
AJ80_09150
Uncharacterized protein.
    
  0.492
AJ80_00981
MRG domain-containing protein.
    
  0.490
AJ80_02715
Uncharacterized protein.
    
  0.472
AJ80_08318
GRIP domain-containing protein.
    
  0.471
AJ80_06579
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
  0.467
Your Current Organism:
Polytolypa hystricis
NCBI taxonomy Id: 1447883
Other names: P. hystricis UAMH7299, Polytolypa hystricis Ph7299, Polytolypa hystricis UAMH7299
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