STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NQU6Nucleotidyltransferase. (634 aa)    
Predicted Functional Partners:
A0A2T2NTI4
ATP-dependent RNA helicase-like protein DOB1.
   
 
 0.912
A0A2T2NSA3
Uncharacterized protein.
    
 
 0.887
A0A2T2P5L3
Rcd1-domain-containing protein.
    
   0.886
A0A2T2NFX8
Uncharacterized protein.
  
  
 
0.858
A0A2T2NCR3
Uncharacterized protein.
   
 
 0.834
A0A2T2NPF7
Antiviral helicase.
   
 
 0.693
A0A2T2NEX3
RRM domain-containing protein.
    
 
 0.672
A0A2T2NJD5
Uncharacterized protein.
    
 
 0.556
A0A2T2P4Z5
RNB-domain-containing protein; Belongs to the RNR ribonuclease family.
    
 
 0.556
A0A2T2PB48
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 
 0.556
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.