STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_2107Phenylacetic acid degradation protein PaaC. (287 aa)    
Predicted Functional Partners:
KALB_2106
Hypothetical protein.
 
 0.999
KALB_2105
Phenylacetic acid degradation protein paaA; May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation.
  
  0.998
KALB_2108
phenylacetate-CoA oxygenase, PaaJ subunit.
 
 0.997
KALB_2109
Putative phenylacetic acid degradation NADH oxidoreductase paaE; May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation.
 0.997
KALB_2563
Hypothetical protein.
 
 
 0.984
KALB_2103
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.962
KALB_2104
Protein maoC.
 
  
 0.943
KALB_3251
enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.914
KALB_2096
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.901
KALB_4506
Hypothetical protein.
  
 
 0.720
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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