STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_2146RNA polymerase sigma factor SigC-like protein; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa)    
Predicted Functional Partners:
KALB_2334
RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.855
KALB_6491
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.791
KALB_958
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.766
KALB_1912
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.763
KALB_7336
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.762
KALB_2499
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.744
KALB_3236
Putative membrane protein.
   0.673
KALB_100
RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.628
KALB_2145
Hypothetical protein.
       0.589
KALB_1288
RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.588
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.