STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbpAHypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. (115 aa)    
Predicted Functional Partners:
whiA
Putative sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
 
     0.745
KALB_1968
Response regulator receiver protein.
  
     0.695
KALB_2804
Putative secreted protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.680
KALB_6809
Hypothetical protein.
  
     0.624
KALB_6844
Hypothetical protein.
  
     0.624
KALB_1055
Hypothetical protein.
  
     0.576
KALB_5963
Hypothetical protein.
  
     0.550
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.518
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.518
KALB_2808
OpcA protein.
  
     0.497
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.