STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_6138Hypothetical protein. (371 aa)    
Predicted Functional Partners:
KALB_612
Arginase/agmatinase/formimino glutamase; Belongs to the arginase family.
 
  
 0.919
KALB_8739
Hypothetical protein.
  
  
  0.916
KALB_6966
Hypothetical protein.
  
  
  0.915
KALB_3162
Sarcosine oxidase subunit alpha; Catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10- methylenetetrahydrofolate; Belongs to the GcvT family.
    
 0.909
KALB_5520
Hypothetical protein.
  
  
 
0.907
KALB_7365
Hypothetical protein; Belongs to the arginase family.
    
 0.907
KALB_8575
Hypothetical protein.
    
  0.902
KALB_1233
Aldehyde dehydrogenase, dimeric NADP-preferring; ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes.
   
 
  0.900
KALB_1533
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
KALB_205
Sarcosine oxidase subunit beta; Glycine/D-amino acid oxidases (deaminating).
     
  0.900
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.