STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V5H1Z8Nucleotide-binding domain-containing protein. (362 aa)    
Predicted Functional Partners:
A0A2V5H924
PLP-dependent transferase.
  
 
 0.942
A0A2V5H686
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.938
A0A2V5HI72
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.938
A0A2V5GXI1
Isocitrate lyase.
   
 
 0.887
A0A2V5HJT6
Isocitrate lyase.
   
 
 0.887
A0A2V5HRB9
Putative KHG-aldolase; Belongs to the DapA family.
   
 
  0.880
A0A2V5H1U2
Malate synthase; Belongs to the malate synthase family.
   
 
 0.879
A0A2V5HBU3
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.879
A0A2V5IEY4
Glyoxylate/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.879
A0A2V5ILT5
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.877
Your Current Organism:
Aspergillus violaceofuscus
NCBI taxonomy Id: 1450538
Other names: A. violaceofuscus CBS 115571, Aspergillus violaceofuscus CBS 115571
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