STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293735_00816Unannotated protein. (87 aa)    
Predicted Functional Partners:
GCA_001293735_00815
Unannotated protein.
 
  
 0.984
GCA_001293735_00814
Unannotated protein.
  
  
 0.967
GCA_001293735_00817
Unannotated protein.
  
    0.947
GCA_001293735_00818
Unannotated protein.
  
  
 0.938
GCA_001293735_00813
Unannotated protein.
  
    0.876
GCA_001293735_00812
Unannotated protein.
  
    0.762
GCA_001293735_00811
Unannotated protein.
  
    0.713
GCA_001293735_00799
Unannotated protein.
   
   0.700
GCA_001293735_00819
Unannotated protein.
 
    0.613
GCA_001293735_00971
Unannotated protein.
  
   
 0.607
Your Current Organism:
Lactobacillus gorillae
NCBI taxonomy Id: 1450649
Other names: DSM 28356, JCM 19575, L. gorillae, Lactobacillus gorillae Tsuchida et al. 2014, Lactobacillus sp. GG02, Lactobacillus sp. KZ01, Lactobacillus sp. KZ02, Lactobacillus sp. KZ03, strain KZ01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.