STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13392.1Adenylate kinase. (208 aa)    
Predicted Functional Partners:
AMK13364.1
Ribosomal protein L5P Rpl5p.
 
  
 0.996
AMK13353.1
Ribosomal protein L2P Rpl2p.
 
  
 0.995
AMK13354.1
Ribosomal protein S19P Rps19p.
  
  
 0.995
AMK13361.1
Ribosomal protein L14P Rpl14p.
  
 
 0.995
AMK14242.1
DNA-directed RNA polymerase subunit D RpoD.
 
  
 0.995
AMK14243.1
Ribosomal protein S11P Rps11p.
 
 
 0.995
AMK13295.1
Ribosomal protein S9P Rps9p.
  
  
 0.994
AMK13356.1
Ribosomal protein S3P Rps3p.
  
  
 0.994
AMK13360.1
Ribosomal protein S17P Rps17p.
  
  
 0.994
AMK13366.1
Ribosomal protein S8P Rps8p.
  
  
 0.994
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.