STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AW11_01513Type I secretion outer membrane protein, TolC family. (420 aa)    
Predicted Functional Partners:
AW11_01512
Hypothetical protein.
 
  0.967
AW11_01511
Efflux transporter, RND family, MFP subunit.
 
  0.962
czcA
Cation efflux system protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.960
cusB
Cation efflux system protein CusB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.884
mdtN_1
Multidrug resistance protein MdtN.
  
 0.796
cusA
Cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.711
prsE
Type I secretion system membrane fusion protein PrsE.
  
 0.690
macA_1
Macrolide-specific efflux protein MacA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.646
mdtN_2
Multidrug resistance protein MdtN.
  
 0.646
mdtA_1
Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.632
Your Current Organism:
Accumulibacter sp. BA93
NCBI taxonomy Id: 1454004
Other names: C. Accumulibacter sp. BA-93, Candidatus Accumulibacter sp. BA-93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.