STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO60210.1Hydrolase, alpha/beta fold family. (299 aa)    
Predicted Functional Partners:
CDO60211.1
Acyl dehydratase.
    
  0.782
CDO58432.1
Alpha/beta hydrolase fold.
  
  
  0.756
CDO58439.1
Hydrolase, alpha/beta hydrolase fold family.
  
     0.725
CDO60279.1
Hydrolase, alpha/beta fold family.
  
  
  0.709
CDO58816.1
Hydrolase, alpha/beta fold family protein,At1g52510/AT4G12830 homolog 2.
  
     0.671
CDO60212.1
Hypothetical protein.
    
  0.647
CDO60209.1
3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.589
CDO59200.1
Beta-ketoadipate enol-lactone hydrolase.
  
     0.587
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.577
CDO60213.1
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100).
   
  0.574
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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