STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO61090.1Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (243 aa)    
Predicted Functional Partners:
CDO59030.1
Glutamate synthase [NADPH] large chain.
     
 0.847
CDO59701.1
Probable iron-sulfur binding protein YPO1417.
   
 0.661
CDO60500.1
DNA-3-methyladenine glycosylase.
 
      0.614
CDO61055.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.612
CDO59050.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|GT4; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.584
CDO61157.1
Hydroxymethylglutaryl-CoA synthase.
   
 
 0.580
CDO58608.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
 
  0.575
CDO60870.1
Malonyl CoA-acyl carrier protein transacylase.
 
 
  0.550
CDO60124.1
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100).
    
0.530
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
  
   0.525
Your Current Organism:
Phaeomarinobacter ectocarpi
NCBI taxonomy Id: 1458461
Other names: C. Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter ectocarpi, bacterium Ec32
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