STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KON88162.1Spore gernimation protein GerB; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)    
Predicted Functional Partners:
KON88163.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.949
KON88161.1
Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.902
KON86426.1
Spore gernimation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.790
KON86428.1
Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.758
KON88698.1
Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.727
KON86456.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
KON86010.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
KON89563.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
KON85904.1
sigma-K factor-processing regulatory protein BofA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
KON86288.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
Your Current Organism:
Sporosarcina globispora
NCBI taxonomy Id: 1459
Other names: ATCC 23301, Bacillus globisporus, CCM 2119, CCUG 7419, CIP 103266, DSM 4, HAMBI 471, IFO 16082, JCM 10046, LMG 6928, LMG:6928, NBRC 16082, NCIMB 11434, NRRL B-3396, S. globispora, strain 785, strain W 25, strain W25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.