STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAJ97192.1Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family. (178 aa)    
Predicted Functional Partners:
GAJ97194.1
Chromosome (plasmid) partitioning protein ParA.
 
 
 0.978
GAJ97195.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
 
   
0.859
rsmG
rRNA small subunit 7-methylguanosine methyltransferase GidB; Specifically methylates the N7 position of guanine in position 535 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.848
GAJ99430.1
Cell division protein FtsK.
  
  
 0.765
GAK01552.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.765
GAJ99431.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.757
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.756
GAJ97193.1
Chromosome (plasmid) partitioning protein ParB.
       0.727
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.606
GAJ97196.1
Membrane protein.
       0.504
Your Current Organism:
Geomicrobium sp. JCM19055
NCBI taxonomy Id: 1460649
Other names: G. sp. JCM 19055, Geomicrobium sp. JCM 19055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.